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Books & Book Chapters （专著）

  1. S. Mozar, F. Pan and R. Yu (2015), "Digital TV" in the Handbook of Digital Imaging, edited by M. Kriss. John Wiley & Sons, Ltd: Chichester, UK, pp. 1395-1440.

Journal Papers （期刊论文）

  1. H. Sun, S. Liu, ..., R. Yu, W. Zhong, Y. Wu, Specific TP53 subtype as biomarker for immune checkpoint inhibitors in Lung adenocarcinoma, EBioMedicine, 2020

  2. R. Yu, W. Yang and S. Wang, "Performance evaluation of lossy quality compression algorithms for RNA-seq data," BMC Bioinformatics, 2020

  3. R. Yu and W. Yang, “ScaleQC: A Scalable Lossy to Lossless Solution for NGS Data Compression,” Bioinformatics, 2020

  4. M. Gao, M. Ling, X. Tang, S. Wang, X. Xiao, Y. Qiao, W. Yang, R. Yu, “Comparison of High-Throughput Single-Cell RNA Sequencing Data Processing Pipelines,” Briefings in Bioinformatics, 2020

  5. L. Wang, Y. Jiao, Y. Qiao, N. Zeng, R. Yu, “A novel approach combined transfer learning and deep learning to predict TMB from histology image,” Pattern Recognition Letters, 2020

  6. W. Yang, L. Huang, C. Shi, L. Wang and R. Yu, "UltraStrain: An NGS-Based Ultra Sensitive Strain Typing Method for Salmonella Enterica," Frontier in Genetics, vol. 10, 2019.

  7. J. Hu, C. Si, M. Lind and R Yu, "Preventing Distribution Grid Congestion by Integrating Indirect Control in a Hierarchical Electric Vehicles Management System," IEEE Transactions on Transportation Electrification, 2016.

  8. H. Shu, R. Yu, W. Jiang and W. Yang, "Efficient Implementation of $k$-Nearest Neighbor Classifier Using Vote Count Circuit," IEEE Transactions on Circuit and System II, Vol. 61, No. 6, June 2014.

  9. H. Shu, W. Yang, C. C. Chai and R. Yu, "Demand Response Based on Voluntary Time Dependent Pricing Scheme," APSIPA Transactions on Signal and Information Processing, Volume 3, 2014.

  10. R. Yu, H. Shu and W. Jiang, "Low Complexity Packet Scheduling Algorithms for Streaming Scalable Media Based on Time Utility Function," IEEE Transactions on Multimedia, Vol. 16 , No. 8, pp. 2270 - 2280, Sep 2014. 

  11. H. Shu, R. Yu and H. Huang, "'Optimal Normalization of Prediction Residual for Predictive Coding with Random Access," IET Signal Processing 09/2014 8(7):710-719

  12. R. Yu, Y. Song and M. Nambiar, "System Identification Using Prominent Subspace LMS," Digital Signal Processing 27, 44-56, 2014

  13. W. Yang, R. Yu, M. Nambiar, "Quantifying the Benefits to Consumers for Demand Response with a Statistical Elasticity Model", IET Generation, Transmission & Distribution, Volume 8, Issue 3, p. 503 – 515, March 2014.

  14. R. Yu, "Speech enhancement based on soft audible noise masking and noise power estimation", Speech Communication, 55 (2013), pp. 964-974, 2013.

  15. R. Yu, W. Yang, and S. Rahardja, “A statistical demand-price model with its application in optimal real-time price of electricity,” IEEE Transactions on Smart Grid, Vol. 3, No. 4, Dec 2012.

  16. H. Huang, H. Shu, R. Yu, T. E. Chan, S. Rahardja, "An introduction to AVS lossless audio standard: entropy coding," Audio Engineering (电声技术), vol. 34, no. 12, Dec. 2010.

  17. T. Li, S. Rahardja, R. Yu and S.N. Koh, “On Integer MDCT for perceptual audio coding”, IEEE Transactions on Audio, Speech and Language Processing, Vol. 15, No. 8, pp. 2236-2248, Nov 2007.

  18. F. Pan, Z. Li, K. P. Lim, D. Wu, R. Yu, "Adaptive rate control algorithm for low power video coding systems," Multidimensional Systems and Signal Processing 18 (1), 5-15, 2007.

  19. R. Geiger, R. Yu, J., S. Rahardja, S.-W. Kim, X. Lin, and M. Schmidt, "ISO/IEC MPEG-4 High-Definition Scalable Advanced Audio Coding," Journal of AES, vol. 55, 2007.

  20. R. Yu, S. Rahardja, X. Lin and C.C. Ko, “A fine granular scalable to lossless audio coder, ” IEEE Trans. Speech and Audio Processing, vol. 14, no. 4, pp. 1352-1363, July 2006.

  21. R. Yu, C. Q. Robinson, C. Cheng, "Low-Complexity Binaural Decoding Using Time/Frequency Domain HRTF Equalization," Lecture Notes in Computer Science, vol. 4351, pp. 545-556, Berlin: Springer-Verlag, 2006

  22. H. Huang, S. Rahardja , X. Lin and R. Yu, “Integer MDCT with enhanced approximation of the DCT-IV,” IEEE Transactions on Signal Processing 54(3): 1156-1159 (2006).

  23. H. Huang, R. Yu, X. Lin and S. Rahardja, “A method for realizing a reversible integer type-IV discrete cosine transform,” Electronics Letters, vol. 40, no. 8, April 2004.

  24. R. Yu, C.C. Ko, “Lossless Compression of Digital Audio Using Cascaded RLS-LMS Prediction,” IEEE Trans. Speech and Audio Processing, vol. 11, issue 6, pp. 532 – 537, Nov. 2003.

  25. R. Yu and C.C. Ko, “A Warped Linear Prediction based Subband Audio Coding Algorithm,” IEEE Trans. Speech and Audio Processing, pp. 1 – 8, vol. 10, no. 1, Jan. 2002.

Conference Papers （会议论文）

  1. H. Huang, C. Xu, W. Yang and R. Yu, "A Machine Learning Framework to Determine Geolocations from Metagenomics Profiling," ISMB/ECCB 2019 (accepted). 

  2. S. Wang, W. Yang, X. Zhang, and R. Yu, "Performance Evaluation of IMP: a Rapid Secondary Analysis Pipeline for NGS Data," IEEE International Conference on Bioinformatics and Biomedicine (BIBM) 2018.

  3. W. Yang, Y. Lin, S. Wu, and R. Yu, "Improving Coding Efficiency of MPEG-G Standard Using Context-Based Arithmetic Coding," IEEE International Conference on Bioinformatics and Biomedicine (BIBM) 2018.

  4. C.-C. Chai, W. Yang, L. Xiang, C.-Y. Wong, R. Yu, Low Complexity Probabilistic Demand-side Bidding Strategies for Singapore Electricity Market, IEEE 4th World Forum on Internet of Things, 2018.

  5. H. Zhou, R. Yu, Y. Song and H. Shu, "A New Noise Annoyance Measurement Metric for Urban Noise Sensing and Evaluation," IEEE ICASSP 2017.

  6. Y. Song, R. Yu, H. Zhou, H. Shu, "Annoyance Measurement of Singapore Urban Environmental Noise," IEEE Tencon 2016.

  7. H. Shu, W. Jiang, X. Bao, H. Zhou and R. Yu, "Enhanced Vote Count Circuit based on NOR Flash Memory for Fast Similarity Search," ICASSP 2016 .

  8. H. Shu, W. Jiang and R. Yu, "K-Nearest Neighbors algorithm based on weak bit implementation on enhanced vot count circuit," MMSP 2015 (top 10% best paper).

  9. H. Shu, W. Jiang and R. Yu, "Study on Weak Bit in Vote Count and its Application in k-Nearest Neighbors Algorithm, " ICIEA 2015.

  10. T. Ho, R. Yu, J. R. Lim and P. Franti, "Modelling Implications & Impacts of Going Green with EV in Singapore with Multi-agent Systems,” Special Session: Signal and Information Processing Applications of Smart Grids and Energy, APSIPA 2014.

  11. W. Yang, R. Yu, W. Jiang, H. Shu, "Efficient implementation of Gaussian Mixture Models using vote count circuit," Asia-Pacific Signal and Information Processing Association, 2014

  12. W. Yang, T. Ho, X. Liu, C. C. Choy and R. Yu, "An Overview and Evaluation on Demand Response Program in Singapore Electricity Market," IEEE Conference on Energy Conversion (CENCON), 2014 

  13. W. Yang and R. Yu, "The effect of distributed energy storage on real-time pricing," ICIEA 2014.

  14. H. Huang, H. Shu and R. Yu, "Lossless Audio Compression in the New IEEE Standard for Advanced Audio Coding," ICASSP 2014.

  15. W. Yang, X. Bao, R. Yu, "Modeling Price Elasticity of Electricity Demand using AIDS Model," IEEE PES Innovative Smart Grid Technology (ISGT) 2014.

  16. W. Jiang, R. Yu, "High-Performance, Very Low Power Content-based Search Engine," ICME 2013 International Workshop on GREEN multimedia: Energy-efficient Multimedia Computing, Communication and Presentation, 2013.

  17. R. Yu, H. Shu, and S. Rahardja, "Time-Utility Function Based Packet Scheduling Algorithm for Streaming Scalable Media," IEEE International Conference on Multimedia and Expo (ICME) , 2013.

  18. H. Zhou, H. Shu, R. Yu, H. Huang, and S. Rahardja, "A novel scalable audio coding scheme, " IEEE International Conference on Audio, Speech and Signal Processing (ICASSP), 2013.

  19. H. Shu, R. Yu and S. Rahardja, "Dynamic incentive strategy for voluntary demand response based on TDP scheme," Special Session on Signal and Information Processing Techniques for Smart Grid, APSIPA 2012.

  20. W. Jiang, Y. Zhu, X. Bao, and R. Yu, "Cloud-based audio fingerprinting service," Special Session on Immersive Audio and Cloud-Assisted Audio Processing, APSIPA 2012.

  21. X. Bao and R. Yu, "Streaming of scalable multimedia over content delivery cloud," Special Session on Immersive Audio and Cloud-Assisted Audio Processing, APSIPA 2012.

  22. H.-Y. Huang, Y. Zhu, D. Wu and R. Yu, "Detecting Intelligibility by Linear Dimensionality Reduction and Normalized Voice Quality Hierarchical Features," INTERSPEECH 2012.

  23. R. Yu, Ying S., and S. Rahardja, "LMS in prominent system subspace for fast system identification," IEEE International workshop on Statistical Signal Processing (SSP), 2012.

  24. W. Yang, R. Yu and S. Rahardja, "Benefits to Consumers under RTP with a Statistical Demand Model," IEEE Innovative Smart Grid Technology Asia (ISGT-ASIA), 2012.

  25. R. Yu, W. Yang and S. Rahardja, “Optimal real-time price based on statistical demand elasticity model of electricity,” in Proc. 2nd IEEE International Conference on Smart Grid (SmartGridComm), 2011.

  26. H. Shu, R. Yu, H. Huang and S. Rahardja, “Normalization of LPC Residue for Random Access Frame in Audio Coding ,” in Proc. IEEE Workshop on Applications of Signal Processing to Audio and Acoustic (WASPAA), 2011.

  27. R. Yu, H. Shu, and S. Rahardja, “An Adaptive Streaming System for MPEG-4 Scalable to Lossless Audio,” in Proc. IEEE Workshop on Applications of Signal Processing to Audio and Acoustic (WASPAA), 2011.

  28. H. Shu, R. Yu, and S. Rahardja, “Scalable Audio Streaming Based on Linear Rate-MNR Model,” in Proc. 6th IEEE Conference on Industrial Electronics and Applications (ICIEA), 2011.

  29. R. Yu, D. Wu, J. Chen, S. Rahardja, “A low complexity packet scheduling algorithm for streaming MPEG-4 SLS,” in Proc. IEEE International Workshop on Multimedia Signal Processing (MMSP) 2011.

  30. H. Shu, H. Huang, T. E. Chan, R. Yu, S. Rahardja, “An Introduction to AVS-P3 Lossless Audio Coding,” in 129th AES convention, Oct 2010, San Francisco.

  31. T. Li, R. Yu, H. Shu and S. Rahardja, "Fixed quality layered truncation for scalable lossless audio," in IEEE Conference on Industrial Electronics and Application (ICIEA), 2010.

  32. Y. Song, S. Rahardja, R. Yu, “Beamforming performance of circular microphone array on spherical platform near bottom boundary” in Proc. IEEE International Conference on Multimedia and Expo ( ICME), 2010.

  33. R. Yu, “A low-complexity noise estimation algorithm based on smoothing of noise power estimation and estimation bias correction,” in Proc. IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP), 2009.

  34. R. Yu, “A perceptual model based speech enhancement algorithm,” 125th AES convention, Oct. 2008, San Francisco.

  35. H Huang, S Rahardja, X Lin, R Yu, P Franti, Cascaded RLS-LMS prediction in MPEG-4 lossless audio coding, in Proc. IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP), 2006.

  36. R. Geiger, M. Schmidt, J. Herre, R. Yu, "MPEG-4 SLS - Lossless and near lossless audio coding based on MPEG-4 AAC," in second International Symposium on Communications, Control and Signal Processing (ISCCSP), 2006.

  37. R. Yu, T. Li, S. Rahardja, “Perceptually Enhanced Bit-Plane Coding for Scalable Audio,” in Proc. IEEE International Conference on Multimedia and Expo (ICME), 2006.

  38. R. Yu, X. Lin, S. Rahardja and C.C. Ko, “Improving coding efficiency for MPEG-4 scalable lossless coding,” in Proc. IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP), 2005.

  39. R. Zhang, R. Yu, Q.-B. Sun, W.-C. Wong, "A New Bit-Plane Entropy Coder for Scalable Image Coding," in Proc. ICME 2005.

  40. Z. Li, Q. Sun, Y. Lian and R. Yu, “A Scalable Watermarking Scheme for the Scalable Audio Coder,” in Proc. IEEE International Conference on Communication (ICC), 2005.

  41. T. Li, R. Yu, S. N. Koh, “Study on Rounding Errors of INTMDCT in Perceptual Audio Coding,” in Proc. 7th IEEE International Symposium on Multimedia (ISM), 2005.

  42. D.-Y. Huang, X. Lin, R. Yu, Sensitivity analysis of a cascade RLS-LMS algorithm for different resolution audio signals, in Proc. IEEE International Conference on Multimedia and Expo (ICME), 2004.

  43. R. Yu, R. Geiger, S. Rahardja, J. Herre, X. Lin, and H. Huang, “MPEG-4 Scalable to Lossless Audio Coding, ” 117th AES convention, Oct. 2004, San Francisco.

  44. R. Yu, X. Lin, S. Rahardja and C.C. Ko, “A Scalable Lossy to Lossless Audio Coder for MPEG-4 Audio Scalable Lossless Coding,” in Proc. IEEE International Conference on Acoustic, Speech, and Signal Processing (ICASSP), 2004. (invited paper)

  45. H. Huang, S. Rahardja, R. Yu, and X. Lin, “A Fast Algorithm of Integer MDCT for Lossless Audio Coding, in Proc. IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP), 2004.

  46. R. Yu, X. Lin, S. Rahardja and C.C. Ko, “A Statistics Study of the MDCT Coefficient Distribution for Audio,” in Proc. IEEE International Conference on Multimedia and Expo (ICME), 2004.

  47. H. Huang, X. Lin, S. Rahardja, and R. Yu, “A method for realizing reversible integer type-IV discrete cosine transform (IntDCT-IV),” in Proc. International Conference on Signal Processing (ICSP), 2004.

  48. D. Wu, S. Wu, K. P. Lim, R. Yu and F. Pan, "Video coding optimizations on embedded platform," in Proc. International Conference on Signal Processing (ICSP), 2004.

  49. R. Yu, C. C. Ko, S. Rahardja, and X. Lin, “An RLS-LMS Algorithm for Lossless Audio Coding,” in Proc. Asilomar Conference on Signal Processing, Computer System and Communication, 2003.

  50. R. Yu, C.C. Ko, X. Lin, and S. Rahardja, “A Fine Granular Scalable Perceptually Lossy and Lossless Audio Coder,” in Proc. IEEE International Conference on Multimedia and Expo (ICME), 2003.

  51. R. Yu, C.C. Ko, R. Susanto, X. Lin, “Bit-plane Golomb code for sources with Laplacian Distributions,” Proc. ICASSP 2003.

  52. K. P. Lim, D. Wu, S. Wu, S. Rahardja, X. Lin, L. Jiang, R. Yu, F. Pan, Z. Li, S. Yao, G. Feng, C. C. Ko, "Video streaming on embedded devices through GPRS network,", in International Conference on Multimedia and Expo (ICME), 2003.

  53. R. Yu, X. Lin and C.C. Ko, “An Adaptive Levinson-Durbin Algorithm,” 36th Asilomar Conference on Signals, Systems and Computers, USA, 2002.

  54. R. Yu, K. P. Lim, D. Wu, F. Pan, Z. G. Li, G. Feng, and S. Wu, “A 2-Stage Partial Distortion Search Algorithm for Block Motion Estimation,” 3rd IEEE Pacific-Rim Conference on Multimedia, 2002.

  55. D. Wu, K. P. Lim, R. Yu, F. Pan and C. Zhu, “Wireless Video Communication on Embedded System,” in Proc. Sixth International Conference on Signal Processing (ICSP02), 2002.

  56. R. Yu, “Improving Perceptual Quality of Low Bit Rate Audio Coding Using Short-Time Spectral Attenuation,” in Proc. IEEE International Conference on Multimedia and Expo (ICME), 2001.

  57. R. Yu, “Subband Audio Coding Using a Perceptually Hybrid Scalar-Vector Quantization,” in Proc. IEEE International Conference on Multimedia and Expo (ICME), Tokyo, Japan, 2000.

  58. R. Yu and C.C. Ko, “High Quality Audio Coding Using a Novel Hybrid WLP-Subband Coding Algorithm,” in Proc. ISSPA, Brisbane, 1999.

Patents （专利）

  1. R. Yu, X. Lin and S. Rahardja, “Context-based encoding and decoding of signals,” US 7,656,319.

  2. Z Li, F. Pan, D. Wu, R. Yu, G. Feng, D. Wang, “Method and an apparatus for controlling the rate of a video sequences; a video encoding device,” US 7,876,821

  3. R. Yu, R. Radhakrishnan, R. L. Andersen, G. A. Davidson, “Multimode coding of speech-like and non-speech-like signals,” US 8,392,179.

  4. R. Yu, S. Rahardja, X. Lin, “A Method and device for processing bit symbols generated by a data source; a computer readable medium; a computer program element,” US 7,532,763.

  5. R. Yu, “Method and system for frequency domain postfiltering of encoded audio data in a decoder,” EP 2,347,412.

  6. R. Yu, X. Lin, S. Rahardja, “Systems and methods for scalably encoding and decoding data,” US 7,994,946.

  7. R. Yu, X. Lin, S. Rahardja, “Method for encoding a digital signal into a scalable bitstream; method for decoding a scalable bitstream,” US 8,446,947.

  8. M. Fellers, G. A. Davidson, R. Yu, E. M. Benjamin, K. Gundry, “Method for adaptive control and equalization of electroacoustic channels,” US 8,693,699.

  9. R. Yu, P. Brown, “Speech enhancement with voice clarity,” US 8,583,426.

  10. R.Yu, “Noise variance estimator for speech enhancement,” US 8,280,731.

  11. R. Yu, “Speech enhancement with noise level estimation adjustment,” US 8,538,763.

  12. H. Huang, W.B. Choo, R. YU, X. Lin, S. Rahardja, D. Huang, “Encoder, decoder, method for encoding/decoding, computer readable media and computer program elements,” EP 1,847,022.

  13. H. Huang, X. Lin, S. Rahardja, and R. Yu, "Method for Transforming a Digital Signal From the Time Domain into the Frequency Domain and Vice Versa," US 8,126,951.

  14. R. Yu, "Speech Enhancement Employing a Perceptual Model," US 8,560,320

  15. H. Huang, X. Lin, S. Rahardja and R. Yu, "Method for performing a domain transformation of a digital signal from the time domain into the frequency domain and vice versa," US 8,126,950.

  16. R. Yu, "Multi-Microphone Voice Activity Detector," US 8,554,556.

Standard Contributions （国际标准贡献）

  1. R. Yu, X. Lin, S. Rahardja, and H. Huang, "Reduce Complexity for MPEG-4 Audio Scalable Lossless (SLS) Coding", ISO/IEC JTC 1/SC 29/WG 11(MPEG), m11062, Seattle, USA, July. 2004. (Adopted Core Experiment proposal for MPEG-4 Scalable to Lossless coding)

  2. R. Yu, X. Lin, S. Rahardja, and H. Huang, “Proposed Core Experiment for Improving Coding Efficiency of MPEG-4 Audio Scalable Coding (SLS)”, ISO/IEC JTC 1/SC 29/WG 11 (MPEG), m10683, Munich, March, 2004. (Adopted Core Experiment proposal for MPEG-4 Scalable to Lossless coding)

  3. R. Yu, X. Lin, S. Rahardja, and H. Huang, “Proposal of Bit-Stream Syntax Revision for MPEG-4 Audio Scalable Lossless Coding,” ISO/IEC JTC 1/SC 29/WG 11 (MPEG), m10361, Hawaii, Dec., 2003.

  4. R. Yu, X. Lin, S. Rahardja, and H. Huang, “Proposed Core Experiment for improving coding efficiency in MPEG-4 audio scalable coding (SLS)”, ISO/IEC JTC 1/SC 29/WG 11 (MPEG), m10136, Brisbane, Oct., 2003. (Adopted Core Experiment proposal for MPEG-4 Scalable to Lossless coding)

  5. R. Yu, X. Lin, S. Rahardja, and H. Huang, “Technical Description of I2R’s Proposal for MPEG-4 Scalable Lossless Coding (SLS): Advanced Audio Zip (AAZ),” ISO/IEC JTC 1/SC 29/WG 11 (MPEG), m10135, Brisbane, Oct., 2003. (Technology adopted as RM0 of ISO/IEC 14496-3:2001/AMD.5)

  6. R. Yu, X. Lin, and S. Rahardja, “Improvements for Proposed Lossless Audio Codec”, ISO/IEC JTC 1/SC 29/WG 11 (MPEG), m9600, Pattaya, March, 2003.

  7. R. Yu, X. Lin, and S. Rahardja, “Advanced Audio Zip – A Scalable perceptual and lossless audio codec”, ISO/IEC JTC 1/SC 29/WG 11 (MPEG), m9134, Awaji, Dec., 2002. (Response to MPEG Call for Proposal on Lossless Audio Coding)

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